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Comparative Modeling of Gingival Protein and Docking Studies with Natural Flavonoid Inhibitors |
DUBLIN | CORE | METADATA ITEM | METADATA FOR THIS DOCUMENT |
1 | Title | Title of Document | Comparative Modeling of Gingival Protein and Docking Studies with Natural Flavonoid Inhibitors |
2 | Creator | Author's name, affiliation, country | ABHIGNA P1, JAYASREE D2 and SHRAVAN KUMAR GUNDA1 1Bioinformatics Division, Osmania University, Hyderabad, Telangana, India
2University College of Science, Saifabad, Osmania University, Hyderabad, Telangana, India
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3 | Subject | Dicipline(s) | Chemical Science |
3 | Subject | Keywords | Homology modeling, Periodontal disease, Gingivalcrevicular fluid, Autodock |
4 | Description | Abstract | The study of protein structure information provides fundamental aspects into most biochemical functions and consequently into the cause of diseases and possible treatment. Most of the protein structures were not solved experimentally, for this it requires x-ray crystallography, NMR and electron microscopy. Hence, in silico protein structure prediction methods are useful to generate a protein structure. Molecular modeling of proteins are rapidly growing field. The present study deals with homology modeling of B4DJI1 (L-lactate dehydrogenase) protein of gingival crevicular fluid (Gingivitis) by using Modeller 9.15. The model shows that 91.1% of amino acid residues in most favored region. The predicted model was then used to perform molecular docking simulations with natural flavonoid derivatives to assess their ability. The ligand binding residueswere found to be similar to the predicted active site residues |
5 | Publishers | Organizing agency, location | WWW Publications, India |
6 | Contributor | Sponsor(s) | - |
7 | Date | Date (YYYY-MM-DD) | - |
8 | Type | Status & genre | Peer-reviewed Article |
8 | Type | Type | |
9 | Formate | File Formate | PDF |
10 | Identifier | Uniform Resource Identifier | Click Here |
10 | Identifier | Digital Object Identifier | |
11 | Source | Journal/conference title; vol., no. (Year) | Chemical Science Transactions, Volume 5 , Number (2), (2016) |
12 | Lanuguage | English=en | en |
13 | Relation | Supp.files | |
14 | Coverage | | - |
15 | Copyright | Copyright and permissions | |
Chemical Science Transactions | Chem Sci Trans | CST | Online Chemistry Journal | Open Access
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